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New approaches for the generation and analysis of microbial typing data

Record Type:	Electronic resources : Monograph/item
Title/Author:	New approaches for the generation and analysis of microbial typing data/ edited by Lenie Dijkshoorn, Kevin J. Towner, Marc Struelens.
other author:	Dijkshoorn, Lenie.
Published:	Amsterdam ;Elsevier, : 2001.,
Description:	1 online resource (xi, 357 p.) :ill. :
Subject:	Microbiology -
Online resource:	http://www.sciencedirect.com/science/book/9780444507402
ISBN:	9780444507402

New approaches for the generation and analysis of microbial typing data
New approaches for the generation and analysis of microbial typing data[electronic resource] /edited by Lenie Dijkshoorn, Kevin J. Towner, Marc Struelens. - 1st ed. - Amsterdam ;Elsevier,2001. - 1 online resource (xi, 357 p.) :ill.

Includes bibliographical references and indexes.

An introduction to the generation and analysis of microbial typing data / Lenie Dijkshoorn and Kevin Towner -- Theoretical aspects of pattern analysis / Arjen van Ooyen -- Setting-up intra- and inter-laboratory databases of electrophoretic profiles / Herre F. Heersma, Kristin Kremer, Dick van Soolingen and John Hauman -- Fingerprinting of microorganisms by protein and lipopolysaccharide SDS-PAGE / Lenie Dijkshoorn -- rRNA gene restriction pattern determination (ribotyping) and computer interpretation / Patrick A.D. Grimont and Francine Grimont -- Generation and analysis of RAPD fingerprinting profiles / Kevin Towner and Hajo Grundmann -- Analysis of microbial genomic macrorestriction patterns by pulsed-field gel electrophoresis (PFGE) typing / Marc J. Struelens, Raf De Ryck and Ariane Deplano -- Selective restriction fragment amplification by AFLPTM / Paul J.D. Janssen -- Application and analysis of ARDRA patterns in bacterial identification, taxonomy and phylogeny / Mario Vaneechoutte and Marc Heyndrickx -- Insertion sequence (IS) typing and oligotyping / Nicholas A. Saunders -- Molecular characterisation of microbial communities based on 16S rRNA sequence diversity / Erwin G Zoetendal, Antoon DL Akkermans and Willem M de Vos -- From multilocus enzyme electrophoresis to multilocus sequence typing / Dominique A. Caugant.

Rapid molecular identification and typing of micro-organisms is extremely important in efforts to monitor the geographical spread of virulent, epidemic or antibiotic-resistant pathogens. It has become a mainstay of integrated hospital infection control service. In addition, numerous industrial and biotechnological applications require the study of the diversity of organisms. Conventional phenotypic identification and typing methods have long been the mainstay of microbial population and epidemiological studies, but such methods often lack adequate discrimination and their use is normally confined to the group of organisms for which they were originally devised. Molecular fingerprinting methods have flourished in recent years and many of these new methods can be applied to numerous different organisms for a variety of purposes. Standardisation of these methods is vitally important. In addition, the generation of large numbers of complex fingerprint profiles requires that a computer-assisted strategy is used for the formation and analysis of databases. The purpose of this book is to describe the best fingerprinting methods that are currently available and the computer-assisted strategies that can be used for analysis and exchange of data between laboratories. This book is dedicated to the memory of Jan Ursing (1926 - 2000), Swedish microbiologist, taxonomist and philosopher." ... taxonomy is on the borders of philosophy because we do not know the natural continuities and discontinuities ..."

ISBN: 9780444507402

Source: 123042:128568Elsevier Science & Technologyhttp://www.sciencedirect.comSubjects--Topical Terms:

80207
Microbiology
Index Terms--Genre/Form:

96803
Electronic books.

LC Class. No.: QR12 / .N49 2001eb

Dewey Class. No.: 576.012

National Agricultural Library Call No.: QR12 / .N49 2001

National Library of Medicine Call No.: 2001 N-229

New approaches for the generation and analysis of microbial typing data
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300 $a 1 online resource (xi, 357 p.) : $b ill.
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505 0 $a An introduction to the generation and analysis of microbial typing data / Lenie Dijkshoorn and Kevin Towner -- Theoretical aspects of pattern analysis / Arjen van Ooyen -- Setting-up intra- and inter-laboratory databases of electrophoretic profiles / Herre F. Heersma, Kristin Kremer, Dick van Soolingen and John Hauman -- Fingerprinting of microorganisms by protein and lipopolysaccharide SDS-PAGE / Lenie Dijkshoorn -- rRNA gene restriction pattern determination (ribotyping) and computer interpretation / Patrick A.D. Grimont and Francine Grimont -- Generation and analysis of RAPD fingerprinting profiles / Kevin Towner and Hajo Grundmann -- Analysis of microbial genomic macrorestriction patterns by pulsed-field gel electrophoresis (PFGE) typing / Marc J. Struelens, Raf De Ryck and Ariane Deplano -- Selective restriction fragment amplification by AFLPTM / Paul J.D. Janssen -- Application and analysis of ARDRA patterns in bacterial identification, taxonomy and phylogeny / Mario Vaneechoutte and Marc Heyndrickx -- Insertion sequence (IS) typing and oligotyping / Nicholas A. Saunders -- Molecular characterisation of microbial communities based on 16S rRNA sequence diversity / Erwin G Zoetendal, Antoon DL Akkermans and Willem M de Vos -- From multilocus enzyme electrophoresis to multilocus sequence typing / Dominique A. Caugant.
520 $a Rapid molecular identification and typing of micro-organisms is extremely important in efforts to monitor the geographical spread of virulent, epidemic or antibiotic-resistant pathogens. It has become a mainstay of integrated hospital infection control service. In addition, numerous industrial and biotechnological applications require the study of the diversity of organisms. Conventional phenotypic identification and typing methods have long been the mainstay of microbial population and epidemiological studies, but such methods often lack adequate discrimination and their use is normally confined to the group of organisms for which they were originally devised. Molecular fingerprinting methods have flourished in recent years and many of these new methods can be applied to numerous different organisms for a variety of purposes. Standardisation of these methods is vitally important. In addition, the generation of large numbers of complex fingerprint profiles requires that a computer-assisted strategy is used for the formation and analysis of databases. The purpose of this book is to describe the best fingerprinting methods that are currently available and the computer-assisted strategies that can be used for analysis and exchange of data between laboratories. This book is dedicated to the memory of Jan Ursing (1926 - 2000), Swedish microbiologist, taxonomist and philosopher." ... taxonomy is on the borders of philosophy because we do not know the natural continuities and discontinuities ..."
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650 2 2 $a DNA Fingerprinting. $3 255903
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